High throughput capillary electrophoresis system

6783649
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Inventors

Hedberg, Herbert J.
Kangas, Brian
Waters, James L.

Application #

004973

Filed

Dec-3-2001

Published

Aug-31-2004

Current US Class

204/451
204/452
204/453
204/601
204/602
204/603
204/604

International Classes

G01N 027/26; G01N 027/447

Field of Search

204/451 204/452 204/453 204/601 204/602 204/603 204/604

Assignee

Cetek Corporation (Marlborough, MA)

Examiners

Nguyen; Nam

Attorney, Agent or Firm

Weingarten, Schurgin, Gagnebin & Lebovici LLP

US Patent References

4927265   Detector for fluoresc...
5066382   Thermal control for...
5085757   Integrated temperat...
5198091   Capillary cartridge...
5198324   Method for making...
5364521   Apparatus for perfo...
5413686   Multi-channel auto...
5424037   Apparatus for han...
5503994   System for sample...
5578460   Electrophoretic met...
5694215   Optical array and...
5830659   Active microtubule-...
5903348   System and method...
5916428   Automated system f...
6001230   Automated capillar...
6388746   Method, apparatus...
6475361   Capillary electroph...
 

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Citation

Cite This Patent

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Abstract
The invention is directed to a high throughput capillary electrophoresis (CE) system, which comprises multiple mobile CE detector modules that are transportable by a programmable fluid-handling arm assembly to fixed samples in microtiter plate wells for analysis. The CE system of the invention is capable of simultaneously automating sample preparation and multiple CE analysis of the sample in a continuous timely process. The CE detector modules of the invention may be equipped with any suitable detection method, such as an ultraviolet (UV) absorbance or a laser-induced fluorescence (LIF) detector.
 
Claims
What is claimed is:

1. A capillary electrophoresis system comprising:

a base;

a plurality of wells disposed on the base;

an arm assembly mounted to the base and movable in three dimensions;

a detector docking station mounted to the base; and

a detector module comprising a capillary extending from an inlet end to an outlet end, a pair of electrodes extending adjacent the capillary inlet end and the capillary outlet end, and a detector aligned with a portion of the capillary, the arm assembly operative to move the detector module from the detector docking station to a working position with the capillary inlet end and an associated electrode disposed in a selected well and the capillary outlet end and an associated electrode disposed in a corresponding selected well.



Description
BACKGROUND OF THE INVENTION

A Capillary Electrophoresis (CE) separation can be performed to determine what affinity, if any, may exist between some "interesting" target molecule and a small molecule ligand. The origin of the ligand can be from natural product samples, synthesized pure compounds in a combinatorial library, or mixtures of compounds. An exemplary method of screening complex biological materials for use in accordance with the present invention is described in Hughes et al., U.S. Pat. No. 5,783,397 (Jul. 21, 1998), the whole of which is incorporated by reference.

Performing an electrophoresis separation is not typically a process that lends itself to automation and application to high throughput screening (HTS) environments except in relatively simple applications like DNA sequencing. Historically, high sample analysis throughput rates are typically achieved by utilizing an array of capillaries which process samples in parallel. There are several disadvantages of using such multiple capillary array in a practical HTS "factory environment." The cost of producing the intricate capillary array assembly is high. The capillary array temperature can be difficult to control. Time-critical sample preparation steps must be executed for each sample at specific and repeatable times prior to the CE injection and separation event. Using a low temperature process to remove the external polyimide coating to create a sample viewing window in each of the array capillaries (which is mandatory when using capillaries with inside wall surface treatments) can be difficult. The logistics of reprocessing multiple missed samples should a single capillary in the array fail during a run can be complex. For CE systems with multiple capillaries built into a complex and expensive array assembly, if one capillary becomes defective, it is not economically feasible to immediately switch out the whole array. It will be allowed to continue running for a period of time until the number of performing capillaries drops to 90 or 80 percent of the total. In the meantime, special effort must be expended to analyze separately the samples that were to have been processed by the defective channels.